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Carboxylic Acids and Their Derivatives: Acyl-Transfer Reactions and Synthesis, Study notes of Organic Chemistry

An in-depth exploration of carboxylic acids and their derivatives, including acyl-transfer reactions and methods for their synthesis. Topics covered include the structure and properties of carboxylic acids, the formation of acid halides, esters, thioesters, amides, and cyano groups, and the relative stabilities of these derivatives. The document also discusses the synthesis of carboxylic acids through various methods, such as esterification and acid-catalyzed hydrolysis of nitriles.

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Chem 215 F12 Notes NotesDr. Masato Koreeda - Page 1 of 17. Date: October 5, 2012
Chapter 15: Carboxylic Acids and Their Derivatives and 21.3 B, C/21.5 A
“Acyl-Transfer Reactions”
I. Introduction
RZ
O
an acyl group bonded to
an electronegative atom (Z)
RO
O
R, R', R": alkyl, alkenyl, alkynyl,
or aryl group
H
Examples:
R X
OX = halogen
RO
O
RS
O
R N
O
RO
O
R F
O
RCl
O
R Br
O
R I
O
carboxylic acid
R'
R'
R"
R'
R'
O
acid halide*
acid anhydride
ester
thioester
amide
note: R could be "H"
one of or both of R' and R"
could be "H"
* acid halides
acid fluoride acid chloride acid bromide acid iodide
RZ
O
sp2 hybridized; trigonal planar making it relatively "uncrowded"
The electronegative O atom polarizes the C=O group, making the C=O carbon
"electrophilic."
Resonance contribution by Z
RC
Z
O
RC
Z
O
RC
Z
O
The basicity and size of Z determine
how much this resonance structure
contributes to the hybrid.
R
C
Z
O
δ
δ
hybrid
structure
*
* The more basic Z is, the more it donates its electron pair,
and the more resonance structure * contributes to the hybrid.
Trends in basicity:
Cl
O
OR' OH OR' NR'R"
similar basicity
weakest
base
strongest
base
increasing basiciy
Check the pKa values of the conjugate acids of these bases.
pf3
pf4
pf5
pf8
pf9
pfa
pfd
pfe
pff

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Chapter 15: Carboxylic Acids and Their Derivatives and 21.3 B, C/21.5 A

“Acyl-Transfer Reactions”

I. Introduction

R

Z

O

an acyl group bonded to

an electronegative atom (Z)

R O

O

R, R', R": alkyl, alkenyl, alkynyl,

or aryl group

H

Examples:

R X

O

X = halogen

R O

O

R S

O

R N

O

R O

O

R F

O

R Cl

O

R Br

O

R I

O

carboxylic acid

R'

R'

R"

R'

R'

O

acid halide*

acid anhydride

ester

thioester

amide

note: R could be "H"

one of or both of R' and R"

could be "H"

* acid halides

acid fluoride acid chloride acid bromide

acid iodide

R

Z

O

sp

2

hybridized; trigonal planar making it relatively " uncrowded "

The electronegative O atom polarizes the C=O group, making the C=O carbon

" electrophilic ."

Resonance contribution by Z

R

C

Z

O

R

C

Z

O

R

C

Z

O

The basicity and size of Z determine

how much this resonance structure

contributes to the hybrid.

R

C

Z

O

δ

δ

hybrid

structure

* The more basic Z is, the more it donates its electron pair,

and the more resonance structure * contributes to the hybrid.

Trends in basicity:

Cl

O

O R'

OH OR' NR'R"

similar basicity

weakest

base

strongest

base

increasing basiciy

Check the pKa values of the conjugate acids of these bases.

O

R

H

3

C OH

O

H

3

C

O

H

3

C O

O

H

3

C O

O

H

3

C NH

2

O

CH

3

O

H

3

C Cl

O

  • The group obtained from a carboxylic acid

by the removal of the OH is called an acyl group, i.e.,

acetyl group;

often abbreviated as Ac

  • Names of the C

2

C=O derivatives [IUPAC names in parentheses]

H

3

C O Na

O

C

H

2

CH

3

ethyl acetate

(ethyl ethanoate)

acetic acid

(ethanoic acid)

sodium acetate

(sodium ethanoate)

acetamide

(ethanamide)

acetyl chloride

(ethanoyl chloride)

acetic anhydride

(ethanoic anhydride)

C

N

cyano group: considered to be an acid derivative as it can be hydrolyzed to form

an amide and carboxylic acid

H

3

C C N

The suffix - nitrile is added to the name of the hydrocarbon containing the same number

of carbon atoms, including the carbon atom of the CN group.

acetonitrile [IUPAC name: ethanenitrile]

C N

H

3

C-CH

2

- CH

2

- CH

2

- C

5 4 3

2 1

benzonitrile

[IUPAC name]

pentanenitrile

[IUPAC name]

For example,

e.g.,

N

Relative stabilities of carboxylic acid derivatives against nucleophiles

O

R Z

As the basicity of Z increases, the stability of increases because of

added resonance stabilization.

O

R

Z

R

Cl

O

R

OR'

O

R

OH

O

R

NR'R"

O

R

O

O

R O

O

R'

O

acid halide

acid

anhydride

ester carboxylic

acid

amide

carboxylate

less stable

(i.e., more reactive)

toward

nucleophiles

Relative stabilities of

's against nucleophiles

A few naming issues

C

6

H

5

O

benzoyl group;

often abbreviated as Bz

[abbreviated as Ac

2

O]

most stable

(i.e., least reactive)

toward

nucleophiles

III. Synthesis of Carboxylic Acids

(1) With the same number of carbon atoms as the starting material:

R

OH

H H

a.

1 °-alcohol

R

H

O

R

OH

O

aldehyde carboxylic acid

oxidation

oxidation

e.g., pyridinium chloro-

chromate (PCC)

or Swern method

e.g., Jones' reagent

[CrO

3

, H

2

SO

4

, H

2

O, acetone]

*A potential byproduct in the Jones oxidation of a

primary alcohol:

R

O

O

CH

2

- R

(ester)

R

H

O

R

O

O

sodium

carboxylate

aldehyde

b.

Ag

2

O, NaOH, H

2

O

(Tollens reagent)

R

OH

O

carboxylic acid

Na

H

3

O

(to pH ~ 2 )

Selective for aldehyde!

R

H

O

OH

R

H

O

OH

Ag O Ag

R

H

O

OH

Ag

OH

Ag

0

(silver mirror)

H

O

H H

H

H-O

H

Ag

2

O, NaOH, H

2

O

(Tollens reagent)

H

3

O

(to pH ~ 2 )

O-H

O

H H

H

H-O

H

An example of the selective oxidation of an aldehyde group:

(2) Fewer carbon atoms than the starting material:

1. O

3

  1. oxidative work-up

(e.g., Ag

2

O, HO

then H

3

O

O

OH

O

OH

(3) One more carbon atom than the starting material:

a. Use of organometallic reagents

Br

MgBr

δ

δ

Mg

C

O

O

O

C

MgBr

O

O

C

O-H

H

3

O

(to pH ~ 2 )

III Synthesis of carboxylic acid (continued)

( 3 ) b. By an S

N

2 reaction with C N, followed by hydrolysis

Cl

benzyl chloride

C

N

phenylacetonitrile

Na C N

ethanol

NH

2

O

phenylacetamide

H

2

O, HCl

OH

O

H

2

O, H

2

SO

4

, 100 °C

(NH

4

2

SO

4

phenylacetic acid

or directly with

H

2

O, H

2

SO

4

, 100 °C

C N

Mechanism for the acid-catalyzed hydrolysis of nitriles:

R

δ δ

H

O

H

H

R C N H

H

O

H

H O

H

pKa ~ - 10

R

C

N

H

O

H H

H

O

H

R

C

N

H

O

H

H

O

H

H

R

C

N

H

H O

H

R

C

N

H

O

H

H

R

C

NH

2

O

amide

nitrile

R

C

N

H

O

H

H

H O

H

O

R C NH

2

O

H

H

H

O

R C N

O

H

H

O

R C NH

3

O

H

H

From an amide:

H O

H

H

H

H

O

H

H

R C

O

O H

H

R C

O

O H

H

O

H

amide

carboxylic

acid

Note:

Nitriles can be hydrolyzed to the corresponding carboxylates under strongly basic conditions (e.g., NaOH,

H

2

O, Δ). Mechanism? Avoid the formation of a RR’N

species.

V. Esterification

(1) Esterification reactions

H

3

C OH

O

acetic acid

H

3

C-CH

2

- O-H

ethanol

H

H

3

C O

CH

2

CH

3

O

H

2

O

ethyl acetate

The experimental equilibrium constant for the reaction above is:

[ethyl acetate] x [H

O]

[acetic acid] x [ethanol]

K

eq

= = 3. 38

As in any equilibrium processes, the reaction may be driven in one direction by adjusting the

concentration of one of the either the reactants or products (Le Châtelier’s principle).

Equilibrium compositions

H

3

C OH

O

H

3

C-CH

2

- O-H

H

H

3

C O

CH

2

CH

3

O

H

2

O


i) at start: 1.0 1.0 0 0

at equilibrium 0.35 0.35 0.65 0.65_

ii) at start 1.0 10.0 0 0

at equilibrium 0.03 9.03 0.97 0.97_

iii) at start 1.0 100.0 0 0

at equilibrium 0.007 99.007 0.993 0.

_____________________________________________________________________________

Taken from “ Introduction to Organic Chemistry”; 4

th

Ed.; Streitweiser, A. et al.; Macmillan Publ.: New York, 1992.

(2) The mechanism for the acid-catalyzed esterification [Commonly referred to as the Fischer

esterification: see pp 623-624 of the textbook].

H

3

C

O

H

3

C-CH

2

18

O-H

H

H

3

C

18

O

CH

2

CH

3

O

H

2

O

Suggesting H

3

C- CH

2

18

OH

not cleaved in this reaction.

H

3

C

O

CH

3

HO

H

optically active

CH

3

O

H

optically active

H

H

3

C

O

H

2

O

this bond

not cleaved this bond

not cleaved

Also,

OH

OH

i) Overall, the Fischer esterification consitutes an acyl transfer from

an OH to an OR' group.

H

3

C

OH

O

H

3

C

O R

O

H

H - OR

ii) Esterification of a carboxylic acid can't take place in the presence of base.

Base deprotonates the carboxylic acid, forming a carboxylate anion, thus preventing

a nucleophile (i.e., ROH) from attacking the carbonyl carbon.

V. Esterification (cont’d)

Mechanism for the acid-catalyzed esterification

H

3

C O

O

H

H B

H

3

C O

O

H

S

O

O

O O

H

H

H

H

3

C O

O

H

H

resonance stabilized

C

2

H

5

- OH

H C

3

C O

O

O

H

H

5

C

2

H

H C

3

C O

O

O

H

H

5

C

2

H

tetrahedral, sp

3

intermediate

H

ester hydrate

H C

3

C O

O

O

H

H

5

C

2

H

H

H

3

C O

O

C

2

H

5

+ H

2

O

H

3

C O

O

C

2

H

5

ester [ethyl acetate]

acid [acetic acid]

H

alcohol

H

2

SO

4

C

2

H

5

OH

(acid catalyst)

pK

a

C

2

H

5

- O- H

H

pK

a

H

3

C O

O

H

H

pK

a

note:

H

3

C OH

O

acetic acid

H

3

C-CH

2

- O-H

ethanol

H

H

3

C O

CH

2

CH

3

O

H

2

O

ethyl acetate

Use H-B for the Brφnsted acid.

B

H B

B

lone pair-

assisted

ionization!

Notes: i) The acid-catalyzed esterification reaction is reversible. The reverse reaction from an ester with

an acid and water is the acid-catalyzed hydrolsis of an ester to form the corresponding acid and alcohol.

ii) The C=O lone pairs are more “basic” than those of the ether oxygen of an ester (i.e., - OR).

H

3

C O

O

H

H

3

C O

O

H

H

3

C O

O

H

H

H

3

C O

O

H

H H

H B

H B

no resonance stabi-

lization of the charge

"more

basic"

The charge stabilized by the two

identical resonance contributors.

X

H

3

C O

O

H

H

C

2

H

5

- OH

H

3

C

O

O

H

H

C

2

H

5

- O

H

δ+

δ+

iii) Direct S

N

2 - like substitution not possible at an sp

2

center

Not feasible

Chapter 15: Carboxylic Acids and Their Derivatives.

VI. Ester Formation: Some of Other Commonly Used Methods

(1) From carboxylic acids

a. With diazomethane

O H

O

benzoic acid

H

2

C N N

HOCH

3

(solvent)

O CH

3

O

H

2

C N N

O

O

H

3

C N N

N N

(gas)

ester [methyl benzoate]

(diazomethane)

S

N

b. With base and reactive alkyl iodide [usually CH

3

I or CH

3

CH

2

I] or sulfate [usually

(CH

3

)

2

SO

4

(dimethyl sulfate) or CH

3

CH

2

SO

4

(diethyl sulfate)]

OH

HO

HO

O

O

H

H

H

H H

OH

HO

HO

O

O

H

H

H H

OH

HO

HO

O

O

CH

3

H

H

H H

CH

3

I

NaHCO

3

(weak base)

DMA* (solvent)

N , N - dimethylacetamide: polar aprotic solvent that can dissolve NaHCO

3

Na

H

3

C I

NaI

S

N

N(CH

3

2

O


O

H

O

N

O

O

O S O

O

O

(diethyl sulfate)

N , N - dimethylformamide: polar aprotic solvent that can dissolve Na

2

CO

3

Na

2

CO

3

(weak base)

DMF* (solvent)

O

CH

2

CH

3

O

N

O

O

H N(CH

3

2

O

(2) With Acid Anhydrides and Acid Chlorides from Alcohols

OH

H

3

CO

O

H

3

CO

CH

3

O

H

3

C O CH

3

O O

[Ac

2

O]

[acetic anhydride]

N

[pyridine: solvent]

OAc

H

3

CO

or

Ac=acetyl

CH

3

O

The reaction mechanism involves

the initial formation of

N

CH

3

O

VII. Lactone Formation

Lactone : A cyclic ester; usually formed from a carboxylic acid and hydroxyl groups in the

same molecule, by an intramolecular reaction.

O

OH

O

H

H

2

O

H

Five- and six-membered lactones are often more stable than their corresponding open-chain hydroxy acids.

Lactones that are not energetically favored may be synthesized from hydroxy acids by

driving the equilibrium toward the products by continuous removal of the resulting water.

OH

O

O

H

2

O

9 - hydroxynonanoic acid

9 - hydroxynonanoic

acid lactone

p - TsOH (catalytic)

benzene

(reflux)

(continuously

removed by using

a Dean Stark

apparatus)

H

The mechanism for the formation of lactones from their hydroxy acid precursors follows

exactly the same pathway as in the (intermolecular) esterification reaction.

VIII. Transesterification

Transfer of an acyl group from one alcohol to another. A convenient method for the

synthesis of complex esters starting from simple esters.

R

O

R'

R

O

R"

O O

R"OH, acid or base catalyst

R'OH, acid or base catalyst

acid-catalyzed:

O

CH

3

O

O

HO-CH

3

p - TsOH (catalytic)

H

base-catalyzed:

(CH

2

16

CH

3

(CH

2

16

CH

3

(CH

2

16

CH

3

O

O

O

H

3

C

O (CH

2

16

CH

3

O

NaOCH

3

(catalytic)*

HOCH

3

(excess)

tristearin (a fat)

H

H

H

glycerol

*Speculate as to why only a catalytic amount of NaOCH

3

is needed here.

The mechanism for the transesterification process involves steps almost identical to those given acid-

catalyzed and base-catalyzed ester hydrolysis. However, the major difference is not using water in the

transesterification reaction.

VIII. Acylation of ammonia and Amines: Synthesis of Amides

Acylation of amines: a. With acid anhydrides (cont’d)

  • Selective reaction on an amino group over a hydroxyl group

OH

NH

2

H

3

C O CH

3

O O

OH

H

N

CH

3

O

O CH

3

O

(acetic anhydride)

OH

NH

3

Note stoichiometry between an amine and acid anhydride (explanation on this in section VIII b below).

Also, even if excess acetic anhydride is used, only the amide product can be obtained selectively.

Acetylation of a hydroxyl group with an acid anhydride is quite slow at room temperature. However,

when the reaction is carried out in the presence of pyridine, both NH

2

and OH get acetylated.

OH

NH

2

H

3

C O CH

3

O O

O

H

N

CH

3

O

O CH

3

O

(acetic anhydride)

N

(pyridine)

CH

3

O

N

H

b. With acid chlorides: highly reactive with amines: Treatment of a 1°- or 2°-amine with

an acid halide results in the rapid formation of its amide derivative. However, because of

the extreme acidity of the N

  • H in the initially produced amide-like product, at least two

mol. equivalents of an amine are required (see the mechanism shown below).

Cl

O

HN(CH

3

2

N

O

H

2

N(CH

3

2

CH

3

CH

3

Cl

Mechanism:

Cl

O

HN(CH

3

2

Cl

O

N

H

3

C CH

3

H

O

N

H

3

C CH

3

H

HN(CH

3

2

N

O

H

2

N(CH

3

2

CH

3

CH

3

Cl

Cl

extremely acidic!

Alternatively, with the use of an appropriate base (usually a tertiary amine), an amide can

be prepared in high yield with only one mol. equivalent of a 1°- or 2°-amine.

Cl

O

HN(CH

3

2

N

O

HN(CH

2

CH

3

3

CH

3

CH

3

Cl

N(CH

2

CH

3

3

N(CH

2

CH

3

3

O

Note: Even if a tertiary amine reacts with an acid halide,

the resulting quaternary amine product undergoes reaction

with a halide anion to recover the original acid halide.

Cl

VIII. Acylation of ammonia and Amines: Synthesis of Amides (cont’d)

c. With esters and lactones

Esters and lactones easily react with 1° or 2°-amines to form amides and alcohols, often

referred to as aminolysis; ammonolysis when ammonia (NH

3

) is used.

OCH

2

CH

3

O

NH

2

CH

3

N

H

CH

3

O

HOCH

2

CH

3

OCH

2

CH

3

O

NH

2

CH

3

OCH

2

CH

3

O

N

H

H

CH

3

OCH

2

CH

3

N

CH

3

O

H

H

N

H

CH

3

O

HOCH

2

CH

3

Mehanism:

Unlike the reaction of an acid chloride and an amine that requires two equivalents of amine, the aminolysis

of an ester or lactone requires only one equivalent of amine. This is because the more basic alcoxide

generated picks up the H+ generated in the reaction intermediate (see above).

More examples:

Cl

OCH

2

CH

3

O

Cl

NH

2

O

HOCH

2

CH

3

NH

3

H

2

O

  • 10 °C, 1 hr

In the example shown above, the low reaction temperature as well as short reaction time are necessary in

order to avoid the S

N

2 reaction at the C-Cl site.

N

O

O

O

Br

O

O

NH

3

(CH

3

3

COH/THF

(solvent)

0 °C

N

O

O

O

Br

OH

O

NH

2

One of the key steps used in the synthesis of

Tamiflu.

d. With carboxylic acids

An amide can also be prepared directly from a carboxylic acid and a 1°- or 2°-amine. However, the

reaction mixture needs to be heated at high temperatures in order to form an amide bond from the initially

formed ammonium carboxylate salt.

Ph OH

O

H

2

NPh

Ph O

O

H

3

NPh

Ph NHPh

O

H

2

O

225 °C!

225 °C!

IX. Reactions of Carboxylic Acid Derivatives

(1) Reduction with hydride reagents: (ii) LiAlH

4

reduction of amides

mechanism :

R NR'R"

O

amide

Li

Al

H

H

H

H

R NR'R"

O

H

H Al

H

H

Li

R N

H

Li

Al

H

H

H

O

Li

Al

H

H

H

Y

R NR'R"

H H

R NR'R"

H H

H

2

O

workup

+ 2 H

2

  • Al(OH)

3

  • LiOH

R

N

R"

O

R'

R

N

R"

H

R'

H

  1. LiAlH

4

  1. aqueous

workup

amine!

R'

R"

Li

Unlike an OR group, the N of an NR'R" group is basic and nucleophilic.

Thus, it donates its lone-pair electrons to kick out Al-O- species.

(2) Reactions with Organometallic Reagents: Grignard Reagents

Ph OCH

3

O

+ 2 CH

3

MgBr

THF

(solvent)

(usually with saturated

aqueous NH

4

Cl)

aqueus workup

Ph OH

H

3

C

CH

3

HOCH

3

2 Mg(OH)

2

2 Br

Ph OCH

3

O

+ CH

3

MgBr

THF

(solvent)

(usually with saturated

aqueous NH

4

Cl)

aqueus workup

Ph OH

H

3

C

CH

3

HOCH

3

Mg(OH)

2

Br

(i) esters

Ph OCH

3

O

ca. 1 : 1

virtually no

Ph CH

3

O

(acetophenone)

obtainable.

Ph OCH

3

O

Ph OCH

3

H

3

C

MgBr

δ

δ

H

3

C

O MgBr

Ph

H

3

C

O

H

3

C MgBr

Mechanistic interpretation:

Ph OH

H

3

C

CH

3

Ph

CH

3

H

3

C

O MgBr

slow fast fast

aqueous

work-up

ketone C=O carbon :

far more electrophilic

than ester C=O carbon

*As soon as a small amount of an ester

reacts with the Grignard reagent, the adduct

immediately produces a ketone, which

reacts quite rapidly with the Grignard reagent

in solution, thus not accumulating the ketone

product.

H

3

CO MgBr

IX. Reactions of Carboxylic Acid Derivatives : (2) Reactions with Organometallic Reagents

(ii) Reaction with carboxylic acids: Grignard reagents react to form carboxylate salts and

the resulting salts do not undergo a further reaction with the Grignard reagents at room

temperature.

δ δ

Ph O

H

O

H

3

C MgBr

Ph O

O

MgBr

CH

4

C=O C too non-electrophilic to reaction with an additional equivalent of a

Grignard reagent

H

3

C MgBr

x

In contrast, more nucleophilic organolithium reagents can add to the intially produced lithium salt.

δ δ

Ph O

H

O

H

3

C Li

Ph O

O

Li

CH

4

Ph O

H

O

2 H

3

C-Li

Ph

OLi

OLi

CH

3

CH

4

acidic workup

(pH 1 - 2 )

Ph O

CH

3

H

2

O 2 LiOH

mechanism :

δ δ

H

3

C Li

Ph

OLi

OLi

CH

3

Ph

OH

OH

CH

3

Ph O

CH

3

reaction

end-product

H

3

O

Ph

OH

O

H

3

C

H

H

Ph O

CH

3

H

OH

2

ketone

carboxylic

acid

(iii) Reactions with amides: In general, amides are not quite reactive with most

organometallic reagents (RM), but under forcing conditions, they react similarly as esters.

N - Methoxy- N - methylamides (Weinreb amides) : special class of amides that react with most

RMs and the initially formed addition products exist as stable chelate, thus affording ketones upon acid

hydrolysis.

Ph N

O

CH

3

O

CH

3

N - methoxy- N - methylamide

H

3

C MgBr

Ph N

O

CH

3

O

CH

3

H

3

C

Mg

Br

5 - membered, stable chelate;

does not fragment to a C=O species

acidic workup

(pH 1 - 2 )

Ph O

CH

3

N

O

CH

3

CH

3

H

H

Ph N

O

CH

3

O

CH

3

H

3

C

Mg

Br

Ph N

O

CH

3

OH

CH

3

H

3

C

O H

H

H

Ph N

O

CH

3

OH

CH

3

H

3

C

H

O H

H

H

N

O

CH

3

CH

3

H

Ph O

CH

3

H

OH

2

O H

H

H

Ph O

CH

3

N

O

CH

3

CH

3

H

H

mechanism for the hydrolysis :

Note: Even if excess RM reagents are used, the chelated adduct does not react further with the reagent.

This is an extremely convenient method for the synthesis of ketones from carboxylic acids (via Weinreb

amides).