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Functional Groups and Organic Compounds: Properties, Reactions, and IUPAC Nomenclature, Lecture notes of Organic Chemistry

An overview of functional groups in organic chemistry, their properties, and reactions. Functional groups are sets of bonds with distinct properties and reactions, often involving heteroatoms or multiple bonds. various functional groups such as alkanes, alkenes, alkynes, aromatics, carbonyls, heteroatoms, and their derivatives. It also discusses the hierarchy of functional groups in IUPAC nomenclature and the difference between functional groups and substituents.

Typology: Lecture notes

2021/2022

Uploaded on 09/27/2022

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Functional Groups
A functional group is a bond or several bonds in an organic molecule that have
certain properties and reactions that are consistent in all molecules containing
those sets of bonds
Functional groups often involve heteroatoms or multiple bonds or both.
Compounds with multiple functional groups will be classified (and react) as
all appropriate functional groups.
o CH3CH=CHCH2CH2OH is an alkene and an alcohol
o CH3CHBrCH2CH2CHO is an aldehyde and an alkyl halide
Single functional groups are not broken apart into sub-groups
o –COOH is a carboxylic acid NOT a ketone and an alcohol
o HCOOR is an ester NOT an aldehyde and an ether.
Functional groups have a strict hierarchy in IUPAC nomenclature and the
ending of the name often depends on the highest priority functional group,
but functional groups and substituents are NOT the same thing.
o Functional groups have distinct reactions, bonds, and properties
E.g. an alcohol, an alkene, a nitrile.
o Substituents are a way of simplifying molecules for naming.
E.g. a methyl group, an ethyl group, an isopropyl group
NOTE:
Whether alkane is a functional group often depends on whom you ask.
Alkanes are often considered to be the basic organic structure and are thus not
included as a functional group, but as a skeleton structure common to all
molecules. Sometimes alkanes are considered to be a functional group if there is
no other functional group in the molecule (e.g. 2,2,3,3-tetramethylbutane is a
branched alkane).
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Functional Groups

A functional group is a bond or several bonds in an organic molecule that have certain properties and reactions that are consistent in all molecules containing those sets of bonds

  • Functional groups often involve heteroatoms or multiple bonds or both.
  • Compounds with multiple functional groups will be classified (and react) as all appropriate functional groups. o CH3CH=CHCH2CH2OH is an alkene and an alcohol o CH 3 CHBrCH2CH2CHO is an aldehyde and an alkyl halide
  • Single functional groups are not broken apart into sub-groups o – COOH is a carboxylic acid NOT a ketone and an alcohol o HCOOR is an ester NOT an aldehyde and an ether.
  • Functional groups have a strict hierarchy in IUPAC nomenclature and the ending of the name often depends on the highest priority functional group, but functional groups and substituents are NOT the same thing. o Functional groups have distinct reactions, bonds, and properties  E.g. an alcohol, an alkene, a nitrile. o Substituents are a way of simplifying molecules for naming.  E.g. a methyl group, an ethyl group, an isopropyl group NOTE: Whether alkane is a functional group often depends on whom you ask. Alkanes are often considered to be the basic organic structure and are thus not included as a functional group, but as a skeleton structure common to all molecules. Sometimes alkanes are considered to be a functional group if there is no other functional group in the molecule (e.g. 2,2,3,3-tetramethylbutane is a branched alkane).

Hydrocarbons

Just C and H atoms

Alkane

C C

All C and H All single bonds Unreactive, except with F 2 , Cl 2 , Br 2 , and O 2 Insoluble in water, low boiling points General alkane abbreviated as R Alkene

C C

All C and H At least one C=C double bond Undergo electophilic addition reactions, hydrogenation, and other reactions at the pi bond. Insoluble in water, low boiling points Alkyne

C C

All C and H At least one C-C triple bond Undergo electophilic addition reactions, hydrogenation, and other reactions at the pi bond. Insoluble in water, low boiling points Aromatic (Arene) C and H (possibly N, O, or S) Conjugated, cyclic, planer systems with 4n+2 pi electrons. Undergo electrophilic aromatic substitution reactions. General aromatic abbreviated as Ar

Carbonyls

Class II: attached to C/H

Aldehydes

(Class II) R H

O

C and O double bond with an H on the same carbon. Polar bonds give moderate bp Nucleophilic Acyl Addition Reactions Redox reactions pKa of alpha H 18-20 (enolate reactions) Ketones (Class II)

R R'

O

C and O double bond with two alkyl groups Polar bonds give moderate bp Nucleophilic Acyl Addition Reactions Reduction reactions pKa of alpha H 19-21 (enolate reactions)

Carbonyls Class I: Attached to a heteroatom (leaving group) Carboxylic Acids (Class I)

R OH

O C and O double bond with an OH on the

same carbon. Acidic Hydrogen pka of OH 4- 5 Hydrogen bonds give very high bp. Nucleophilic Acyl Substitution Reactions Reduction reactions Carbonyl Halides (Class I) R Cl O C and O double bond with a halogen on the same carbon. Very reactive with water Nucleophilic Acyl Substitution Reactions Reduction reactions Anhydrides (Class I) R O O O R' C and O double bond with an acid ester on the same carbon. Moderately reactive with water Nucleophilic Acyl Substitution Reactions Reduction reactions Esters (Class I)

R OR'

O C and O double bond with^ an ether on

the same carbon. Nucleophilic Acyl Substitution Reactions Reduction reactions pKa of alpha hydrogens ~25 so can do enolate reactions Amides (Class I)

R N
O
R N
O
H
H
H
R
R N
O
R
R

C and O double bond with an amine on the same carbon. Lots of double bond character in the C- N bond due to resonance. N-H are moderately acidic and can hydrogen bond. Nucleophilic Acyl Substitution Reactions Reduction reactions Nitriles (Class I)

R C N

C and N triple bond. Same oxidation state as Class I carbonyls. Hydrolizes to a carboxylic acid Reduction reactions

Advanced

Imines C

N

C/N double bond. Easily converted to carbonyl in the presence of water. Enols

C

C

OH Formation is unfavored and the diol will

usually revert to the carbonyl unless the alkene forms an aromatic ring

Geminal Diol C

HO OH Not isolable. Formation is unfavored

except with formaldehyde and electron poor carbonyls. Formation catalyzed by acid or base Hemiacetals (^) C HO OR Easily reversed to carbonyl, except with cyclic hemiacetals. Formation catalyzed by acid or base. Acetals (^) C RO OR Formation catalyzed by acid only. Stable and isolable except in the presence of acid.