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Genes and Development: Understanding Human Anomalies through Mutations, Essays (university) of Microbiology

An overview of human development, focusing on genetic disorders caused by mutations in specific genes. Topics include greig cephalopolysyndactyly, waardenburg’s syndrome, developmental stages, and ways to study genes in development. Realized through mutations in genes like gli3, pax3, and zinc finger genes, these disorders result in cranial and hand abnormalities.

What you will learn

  • What genes are associated with Waardenburg’s syndrome?
  • What role do transcription factors play in human development?
  • What are the causes and effects of Greig cephalopolysyndactyly?
  • How does cell differentiation occur during human development?
  • What methods are used to study genes in development?

Typology: Essays (university)

2018/2019

Uploaded on 10/13/2019

drsheelendra-mangal-bhatt
drsheelendra-mangal-bhatt 🇮🇳

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Greig cephalopolysyndactyly
Polydactyly - extra digits
Syndactyly - webbed digits
Developmental malformation syndrome
Mutation in GLI3 gene on chromosome 7
Zinc finger gene
Cranial, hand abnormalities
Genes in Development - November 5, 2000
Karen B. Avraham, Instructor
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Greig cephalopolysyndactyly

Polydactyly - extra digits

Syndactyly - webbed digits

Developmental malformation syndrome

Mutation in GLI3 gene on chromosome 7

Zinc finger gene

Cranial, hand abnormalities

Genes in Development - November 5, 2000

Karen B. Avraham, Instructor

Waardenburg’s syndrome

Mutation in PAX3 gene on chromosome 2q

Paired-box transcription factor gene

Deafness, white forelock, iris heterochromia

Developmental genes discovered through mutations

Fruitfly ( Drosophila )

Zebrafish

Worm ( C. elegans )

Mouse

spontaneous

ENU-induced

transgenics

knock-outs

Frog

Ways to study genes in development

In situ hybridization

Sections

Whole mount

During establishment of body plan, cells adopt specific cell fates

Cell fates: the capacity to differentiate into particular kinds of cells

Determination: process of commitment to a particular fate

As cells proliferate, decisions are made to specify fate of cells

Cells make developmental decisions in context of decisions made

by their “neighbors

Totipotent

uncommitted

Single fate

Inner ear

Eye

Genetic dissection of cell fates

years ago 15

Description of mutant phenotypes

Microsurgical manipulations of embryos

Today

Combination of genetics and recombinant DNA

techniques

Can now identify protein products contributing to these

developmental events

Can fish out related genes from different organisms

Same basic set of regulatory proteins govern major

developmental events in all higher animals

Genes involved in early development: Transcription factors

Control RNA transcription from DNA template by binding to

specific regulatory DNA sequences

Switch genes on and off by activating or repressing gene

expression

Control many genes involved in segmentation, induction,

migration, differentiation, and apoptosis (programmed cell

death)

Three gene families in vertebrates

homeotic genes

paired box genes

zinc finger genes

Homeotic mutation

Homeosis - replacement of one body

In place of normal antennae, an Ante

causes antennal precursor cells to d

Paired-box (PAX) genes

Highly conserved DNA sequence that encodes ~130 aa

First identified in Drosophila

Encode DNA binding proteins

Pax genes identified in mice and humans 8

Mutations in Pax1 cause vertebral malformations in mice

Mutations in Pax3 cause pigmentary abnormalities in mice

Mutations in Pax6 cause small eyes in mice

In humans, mutations in PAX6 cause aniridia (no iris)

In humans, mutations in PAX3 cause Waardenburg’s

syndrome

rearrangements cause rare childhood tumor,alveolar (

) rhabdomyosarcoma

Zinc finger genes

Finger-like projection formed by amino acids

between 2 separated cysteine residues which form

complex with zinc ion

Many DNA binding proteins contain zinc fingers

GLI3 - Greig cephalopolysyndactyly

WT1 (Wilm’s tumor gene)

Increased risk of renal malignancy/ Denyss-

Drash syndrome (abnormal sexual

differentiation and disordered renal

development)

Regulatory cascades: complex network of genes

coordinate developmental pathways

Cells achieve

different roles

through series of “on-

off” decisions

Conditions within

cell allow a master

switch to be regulated

Once master switch

is activated, it sets in

motion a cascade of

“downstream”

regulatory events

In absence of

activation of master

switch, set of default

signals remain in

place

MASTER SWITCH

ON OFF

New development

pathway induced

Default developmental

pathway maintained

or

Downstream regulatory

factors induced

Default regulatory

factors operate

Example: Sex Determination

Relies on regulation of

one transcription factor

by another

Ratio of X

chromosome to sets of

autosomes (X:A ratio) in

early embryo

establishes whether fly

becomes male or

female

Sexual differentiation

carried out by master

regulatory switch and

several downstream

sex-specific genes

Early

Drosophila

embryo

Repression of

specific -

structural genes

Repression of

specific -

structural genes

X:A = 0.5 X:A = 1

Sx/

ON

Sx/

OFF

tra/

ON

tra/

OFF

dsx-M dsx-F

protein protein

dsx RNA dsx RNA

splice splice

maintenance

Genes involved in formation of germ cell precursors

Germ cell precursors - pole cells

Genetic studies in Drosophila has led to discovery of genes

involved

Oskar , Nanos , Tudor

Vasa

dependentmember of DEAD-box family of genes encoding ATP-

RNA helicase

required for assembly and function of pole plasm

identified in many animal species, where it is expressed

specifically in germ-cell lineages

C. elegans - P-granules of eggs

Xenopus - germinal granules of eggs

zebrafish

mouse - Mvh

Knock-out

Example: Vertebrate eye development

E8.5: the optic vesicle

forms as out-pouching of

forebrain

E9.0: optic vesicle

contacts endoderm of head

E9.5: signals from optic

vesicle induce lens placode

E10.0: lens placode

invaginates to lens pit;

optic vesible inaginates to

create optic cup

E10.5: invagination of

lens pit to form lens vesicle

complete. Lens vesicle

detaches from overlying

ectoderm

E12.5: differentiation of

optic cup into neuroretina

and epithelium

The mouse

Whole mount in situ

hybridization

Pax6 expression in developing

mouse eye