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Population Genetics: Understanding Gene Frequencies and Evolution - Prof. Roman E. Boldyre, Study notes of Ecology and Environment

An overview of population genetics, focusing on gene frequencies, models, and the hardy-weinberg equilibrium. Topics include allele frequencies, deterministic and stochastic theories, and the impact of natural selection, genetic drift, and mutation on genetic equilibrium.

Typology: Study notes

Pre 2010

Uploaded on 08/10/2009

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1. Study of changes in gene
frequencies of population
2. Gene frequency- relative
occurrence of gene’s alleles
in population
Population Genetics
3. Models- Allele frequencies,
genealogical, deterministic, &
stochastic
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  1. Study of changes in gene frequencies of population
  2. Gene frequency- relative occurrence of gene’s alleles in population

Population Genetics

  1. Models- Allele frequencies, genealogical, deterministic, & stochastic
  1. Classical population genetics 2. Based on Mendel’s principles of complete dominance, segregation, & independent assortment

Theory of Allele Frequencies

  1. Predictable
    1. Assumes allele frequencies = expected frequencies

Deterministic Theory

  1. True if population sizes are infinite
  1. Less predictable, more probabilistic
  2. Allows for variance around expected frequencies

Stochastic Theory

Population Estimation

N = population =?

nm = sample captured, marked, & released nr = sample recaptured

nrm = sample recaptured & marked

  1. Genetic equilibrium- frequency of alleles in population stays same unless acted on by some factor
    1. Conditions- population must be large & randomly mating with no natural selection, gene flow or mutation

Hardy-Weinberg Equilibrium

Given P + p = 1 Let P = freq of nonPKU allele p = freq of PKU allele Given P^2 + 2Pp + p^2 = 1 Let P^2 = PP = freq of homozygous nonPKU ind 2Pp = freq of heterozygous nonPKU ind p^2 = pp = freq of homozygous PKU ind

Hardy-Weinberg Example

If freq of homozygous PKU ind = 0.0001, then

% homozygous PKU ind = 0.01%

% homozygous PKU individuals

2Pp = 2 ( 0.99 x 0.01) 2Pp = 0.

If freq of heterozygous nonPKU ind = 0.0198 , then

% heterozygous nonPKU ind = 1.98%

% heterozygous nonPKU individuals

  1. Natural Selection
    1. Migration
    2. Genetic Drift
    3. Isolation
    4. Mutation
    5. Meiotic Drive

Changes in Genetic Equilibrium

Time 1

Directional Selection

Time 2

Directional Selection

Time 2

Stabilizing Selection

Time 1

Disruptive Selection