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Study Guide for Midterm Exam 1 - General Biology | BIO 2101, Study notes of Biology

Material Type: Notes; Professor: Pratt; Class: General Biology; Subject: Biology; University: Seattle Pacific University; Term: Autumn 2009;

Typology: Study notes

Pre 2010

Uploaded on 12/15/2009

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Christopher Whitcomb
Biology 2101
Mid-Term #1
Study Guide
1. Polarity – The more an atom wants electrons (0>>N>C≈H)
2. Moles – A way to standardize the quantity of molecules with different elements.
a. Grams/Atomic Weight = Moles (g/mol)
3. Energy
a. Entropy (S)- the amount of disorder
in any system.
b. Enthalpy (H) – the amount of heat
in any system.
c. Gibbs Free Energy (G) – The capacity
of a system to do work (whether a
reaction will take place)
i. ∆G = ∆H-T (∆S)
S- Entropy, H-Enthalpy,
G-Free Energy, T- Absolute T.
d. Exergonic reaction – A spontaneous reaction that will increase entropy.
i. (-∆G)
e. Endergonic reaction –Not spontaneous, requires energy, will decrease entropy in system
i. (+∆G)
4. Isomers
a. Structural Isomers – Differ in covalent arrangement.
b. Geometric Isomers – Differ around a double bond.
c. Optical Isomers – Differ as mirror images.
5. Kingdom-Phylum-Class-Order-Family-Genus-Species
a. King-Philip-Came-Over-For-Good-Soup.
6. Functional Groups
a. Hydrophilic
i. Amino – NH2
ii. Carbonyl –CHO
iii. Carboxyl – COOH
iv. Hydroxyl – OH
v. Phosphate – PO4
vi. Sulfhydrl – SH
b. Hydrophobic
i. Methyl – CH3
pf3
pf4
pf5

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Christopher Whitcomb Biology 2101 Mid-Term #

Study Guide

  1. Polarity – The more an atom wants electrons (0>>N>C≈H)
  2. Moles – A way to standardize the quantity of molecules with different elements. a. Grams/Atomic Weight = Moles (g/mol)
  3. Energy a. Entropy (S)- the amount of disorder in any system. b. Enthalpy (H) – the amount of heat in any system. c. Gibbs Free Energy (G) – The capacity of a system to do work (whether a reaction will take place) i. ∆G = ∆H-T (∆S)  S- Entropy, H-Enthalpy, G-Free Energy, T- Absolute T. d. Exergonic reaction – A spontaneous reaction that will increase entropy. i. (-∆G) e. Endergonic reaction –Not spontaneous, requires energy, will decrease entropy in system i. (+∆G)
  4. Isomers a. Structural Isomers – Differ in covalent arrangement. b. Geometric Isomers – Differ around a double bond. c. Optical Isomers – Differ as mirror images.
  5. Kingdom-Phylum-Class-Order-Family-Genus-Species a. King-Philip-Came-Over-For-Good-Soup.
  6. Functional Groups a. Hydrophilic i. Amino – NH 2 ii. Carbonyl –CHO iii. Carboxyl – COOH iv. Hydroxyl – OH v. Phosphate – PO 4 vi. Sulfhydrl – SH b. Hydrophobic i. Methyl – CH 3
  1. pH a. Acids – Increase in relative H+ b. Bases – Decrease in relative H+ c. Neutral – pH = 7.0 (1e-7)
  2. Amino Acids a. Composed of Amino and Carboxyl b. Monomer-Dipeptide-Tripeptide-Polymer c. Form by Condensation reaction
  3. Protein a. Formed by Condensation reaction b. Primary Structure i. Composed of amino acids c. Secondary structure i. Stabilized by Hydrogen bonds ii. 2 Forms  Alpha helix  Beta pleated sheets d. Tertiary Structure i. Twisting of secondary structure ii. Stabilized by side chains  Hydrophobic  Vander walls  Disulfide Bridges

a. Formed by condensation reactions b. Monosaccharide-Polysaccharide… c. Organic molecules made of carbon d. Monosaccharides with a CHO ration of 1:2: e. Monosaccharides i. Made up of:  Hydroxyls – OH  Carbonyls a. Ketones (O=C) b. Aldehydes (H–C=O) f. Polysaccharides i. Starch – Storage for plants ii. Glycogen – Storage for humans/animals g. Structural Polysaccharides i. Cellulose – Linear Polymer (plant walls)  Parallel Strands joined by a single hydrogen bond (top and bottom) ii. Chitin – Amine Sugar (Arthropods)  Parallel Strands joined by two hydrogen bonds (diagonal, top, bottom) iii. Peptidoglycan – Amine Sugar (Bacteria)  Parallel Strands bonded by peptide bonds

  1. Nucleic Acids a. Formed by phosphodiester reactions b. Nucleotide-Nucleic acid… c. Made up of 3 parts:

i. 5-Carbon Sugar ii. Nitrogen Base  Determines the function of the Acid iii. Phosphate Group  Attaches to 5th^ Carbon d. Two Types i. DNA – Deoxyribonucleic acid  Characterized by Hydrogen bond on 2nd^ Carbon ii. RNA – Ribonucleic acid  Characterized by hydroxyl group on 2nd^ carbon

  1. DNA a. 2 Pairs, 4 bases i. Adenosine – Thymine ii. Guanine – Cytosine b. Replication i. Watson and Crick  Said that DNA self replicated itself a. Unwind b. Separate c. Copy d. Replace
  2. RNA a. Sugar-phosphate Backbone b. Primary structure

c. Glycerol backbone i. Acylgylcerides  Mono, Di, Tri (depending on the amount linked to the backbone) d. Phospholipid i. Have:  Choline  Phosphate  Glycerol  2 Fatty Acids a. 1 Saturated b. 1 Unsaturated ii. Phospholipid + water = Micell